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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.4.1 (Release date: Sat Aug 21 19:23:23 2021 -0700)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: accurate and versatile sequence motif discovery",
Bioinformatics, Mar. 24, 2021.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.271 C 0.229 G 0.229 T 0.271 

MOTIF 1-ATTGCTTCTC STREME-1
letter-probability matrix: alength= 4 w= 10 nsites= 36 S= 2.3e-021
 0.686854 0.000795 0.000795 0.311555
 0.000944 0.000795 0.000795 0.997466
 0.000944 0.000795 0.000795 0.997466
 0.000944 0.000795 0.997317 0.000944
 0.000944 0.997317 0.000795 0.000944
 0.000944 0.000795 0.000795 0.997466
 0.237721 0.153315 0.000795 0.608169
 0.074779 0.770962 0.000795 0.153464
 0.000944 0.153315 0.000795 0.844945
 0.000944 0.997317 0.000795 0.000944

MOTIF 2-ATGACWGTCAT STREME-2
letter-probability matrix: alength= 4 w= 11 nsites= 33 S= 2.1e-017
 0.997466 0.000795 0.000795 0.000944
 0.156250 0.000795 0.000795 0.842160
 0.119332 0.077055 0.802668 0.000944
 0.997466 0.000795 0.000795 0.000944
 0.037861 0.960399 0.000795 0.000944
 0.462288 0.037712 0.037712 0.462288
 0.000944 0.000795 0.960399 0.037861
 0.000944 0.000795 0.000795 0.997466
 0.000944 0.802668 0.077055 0.119332
 0.842160 0.000795 0.000795 0.156250
 0.000944 0.000795 0.000795 0.997466

MOTIF 3-AACTGATAAR STREME-3
letter-probability matrix: alength= 4 w= 10 nsites= 30 S= 3.2e-013
 0.997009 0.000938 0.000938 0.001114
 0.997009 0.000938 0.000938 0.001114
 0.001114 0.996834 0.000938 0.001114
 0.001114 0.000938 0.000938 0.997009
 0.001114 0.000938 0.996834 0.001114
 0.997009 0.000938 0.000938 0.001114
 0.001114 0.088061 0.280328 0.630498
 0.630498 0.000938 0.280328 0.088236
 0.717620 0.280328 0.000938 0.001114
 0.367626 0.000938 0.630322 0.001114

MOTIF 4-TACTCATCACT STREME-4
letter-probability matrix: alength= 4 w= 11 nsites= 27 S= 2.0e-012
 0.001220 0.001028 0.001028 0.996724
 0.690671 0.307081 0.001028 0.001220
 0.001220 0.996532 0.001028 0.001220
 0.001220 0.001028 0.001028 0.996724
 0.001220 0.996532 0.001028 0.001220
 0.996724 0.001028 0.001028 0.001220
 0.001220 0.001028 0.001028 0.996724
 0.001220 0.996532 0.001028 0.001220
 0.996724 0.001028 0.001028 0.001220
 0.001220 0.690478 0.001028 0.307274
 0.001220 0.001028 0.001028 0.996724

MOTIF 5-TAGCACTCA STREME-5
letter-probability matrix: alength= 4 w= 9 nsites= 27 S= 2.0e-012
 0.024673 0.020782 0.020782 0.933764
 0.933764 0.020782 0.020782 0.024673
 0.024673 0.020782 0.929873 0.024673
 0.024673 0.929873 0.020782 0.024673
 0.933764 0.020782 0.020782 0.024673
 0.024673 0.929873 0.020782 0.024673
 0.024673 0.020782 0.020782 0.933764
 0.024673 0.929873 0.020782 0.024673
 0.933764 0.020782 0.020782 0.024673

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p all_sno_sno_viewpoint_dusted.fasta -o streme_all_sno_sno_viewpoint --minw 3 --maxw 30
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CPU:		imlsportmacquarie
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FINALTIME:	1.17 seconds
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